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Release webinars focus on what is new in each release of the VEuPathDB project, including new datasets, demonstrations of searches and features, and a question-answer session.
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| OrthoMCL-7 New Features & Functionality (May 6, 2025) Webinar goals: This webinar features a live demonstration of the exciting new tools and features in the newly released OrthoMCL-7 platform, VEuPathDB's data resource for ortholog groups of protein sequences. Learn how to gain insights from phylogenetic trees, how to use specialized searches to mine orthology resources, find orthologs between two species, and find orthologs for your list of proteins. |
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| 2023 Ticks and Mites Community Webinar (June 22, 2023) Agenda: https://vectorbase.org/vectorbase/app/static-content/tickwebinars.html |
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| Deep dive into content and features of VEuPathDB gene record pages (April 6, 2023) |
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| VEuPathDB Community Annotation Webinar with a focus on updating the Toxoplasma gondii ME49 annotation (March 23, 2023) Webinar goals:
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| Enrichment Analysis Tools in VEuPathDB (February 23, 2023) Description: This webinar will focus on the post-searches enrichment tools. Functional enrichment is never far away from the gene result in VEuPathDB sites. Learn to deploy the enrichment tools and enrichment results to guide the next steps in your research project. Handouts: |
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| The Search Strategy System (February 2, 2023) Description: This webinar focused on the search strategy system. We presented a general background, and demonstrated the preconfigured searches with an emphasis on how to use the system to answer your own biological questions or support your own hypotheses. |
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| VEuPathDB Apollo Annotation and Curation (May 25, 2022) Description:
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| 2022 Ticks and Tick-Borne Pathogens Open Community Webinar Series (8 March to 14 June, 2022) Agenda and recordings: https://veupathdb.org/veupathdb/app/static-content/tickwebinars.html |
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| Analyzing your own data in VectorBase (June 10, 2021) Handouts:
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| The Bioinformatic Resource Centers Webinar Series: Bacterial Resp. Pathogens & PATRIC (June 1, 2021) Description: This webinar will focus on respiratory pathogens and introduce users to bioinformatic resources available at the Pathosystems Resource Integration Center. |
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| Exploring Transcriptomic Data in VectorBase (May 20, 2021) Handout: QandA webinar report Description: This webinar describes how to explore transcriptomic data including:
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| The Bioinformatic Resource Centers Webinar Series: Enterovirus, Picornaviridae & ViPR (May 18 2021) Description: This webinar will focus on respiratory pathogens and introduce users to bioinformatic resources available at the Virus Pathogen Resource. |
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| Web-based analysis of 16S rRNA microbiome data using Nephele and MicrobiomeDB (May 6, 2021) Description: This webinar will focus on using web resources to analyze 16s rRNA microbiome, specifically,
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| The Bioinformatic Resource Centers Webinar Series: Aspergillus and FungiDB (May 4, 2021) Description: This webinar will focus on Aspergillus pathogens and introduce users to bioinformatic resources available at FungiDB. |
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| The Bioinformatic Resource Centers Webinar Series: RSV, Pneumoviridae & ViPR (April 20, 2021) Description: This webinar will focus on respiratory pathogens and introduce users to bioinformatic resources available at the Virus Pathogen Resource. |
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| Building complex search strategies in VectorBase (April 15, 2021) Handout: Introductory/101 guide to construct your first strategy Description: This webinar describes how to build search strategies, including:
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| The Bioinformatic Resource Centers Webinar Series: AMR, bacteria & PATRIC (March 30, 2021) Description: This webinar focused on respiratory pathogens and introduced users to bioinformatic resources available at the Pathosystems Resource Integration Center. |
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| Introduction to VectorBase for the beginner (March 25, 2021) Handout: Guide for former BioMart users Description: This webinar will cover VectorBase basics including
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| The Bioinformatic Resource Centers Webinar Series: Coronaviridae & ViPR (March 16, 2021) Description: This webinar will focus on respiratory pathogens and introduce users to bioinformatic resources available at the Virus Pathogen Resource. |
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| The Bioinformatic Resource Centers Webinar Series: Coccidioides & FungiDB (March 2, 2021) Description: This webinar will feature a lecture from Dr. Bridget Barker from Northern Arizona University and introduce users to bioinformatic resources available at FungiDB.org. |
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| The Bioinformatic Resource Centers Webinar Series: Influenza & IRD (February 16, 2021) Description: This webinar focused on respiratory pathogens and introduced users to bioinformatic resources available at the Influenza Research Database. |
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| Clinical and Epidemiologic Data Exploration for Genomic Researchers (December 9, 2020) Description: In this webinar, we will cover key features and studies in ClinEpiDB that may be of interest to biologists working on infectious diseases. |
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| Introduction to MicrobiomeDB (September 17, 2020) Description:This webinar covered basic usage of MicrobiomeDB.org and described some of its key features. |
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| Metabolic Pathways in VEuPathDB (August 20, 2020) Description: This webinar focused on how to use and explore metabolic pathways in VEuPathDB sites. |
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| Building complex search strategies in VEuPathDB (August 13, 2020) Handout: Building complex search strategies in FungiDB Description: This webinar will demonstrate how to integrate diverse data types in search strategies to answer biological questions and build testable hypotheses. |
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| HostDB: finding host genes responding to infection (August 6, 2020) Description: This webinar will feature beta.HostDB.org and will showcase the types of available data to query host response to infection. |
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| Proteomics data in VEuPathDB (July 30, 2020) Description: This webinar will cover the types of proteomics data and searches available in VEuPathDB, including,
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| Variant data in VEuPathDB (July 23, 2020) Description: This webinar will cover:
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| Introduction to FungiDB - Data and Functionality (July 16th, 2020) Handout: Anatomy of the main page Description: This webinar will cover:
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| RNAseq searches in VEuPathDB (July 9th, 2020) Description: This webinar will demonstrate how to search for differential expression with RNAseq datasets. |
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| Orthology searches and OrthoMCL (July 2nd, 2020) Description: This webinar will demonstrate how to search for homolog genes. |
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| Searching Phenotypic datasets in VEuPathDB (June 25, 2020) Description: This webinar gives an overview of phenotypic data on VEuPathDB sites, including representation of data on gene pages and searches that access all data so that you can find all genes with a certain phenotype. Phenotype data on our sites is based on cellular imaging experiments, and mutagenesis studies (among others). |
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| Special event: Introduction for VectorBase users (June 18, 2020) Description: Topics covered included:
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| MapVEu: population biology map filtering and searches (June 11, 2020) Description: This webinar will demonstrate how to use the MapVEu tool in VEuPathDB. Topics covered will include:
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| Motif searches and regular expressions in VEuPathDB (June 4, 2020) Handout: Motifs and regular expressions 1 Handout: Motifs and regular expressions 2 Handout: Motifs and regular expressions 3 Handout: Motifs and regular expressions presentation slides Description: This webinar will describe the different available motif searches including regular expressions in VEuPathDB. Topics covered will include:
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| GO and other enrichment analyses in VEuPathDB (May 28, 2020) Handout: Enrichment Analysis in VEuPathDB Additional Details: This webinar will guide you through the process of running enrichment analyses in VEuPathDB. Topics covered will include:
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| Manual gene annotation in Apollo (May 21, 2020) Description: This webinar will guide you through the process of updating and fixing gene models based on underlying data. Topics covered will include:
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| Running a Galaxy workflow and integrating data into VEuPathDB (May 14, 2020) Handout: How to set up an account in VEuPathDB Galaxy Handout: RNA sequence data analysis in VEuPathDB Galaxy Part 1 Handout: RNA sequence data analysis in VEuPathDB Galaxy Part 2 Description: This webinar will guide you through the process of running a workflow in galaxy and exporting the results to your VEuPathDB workspace. |
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| Building search strategies in VEuPathDB (May 7th, 2020) Handout: Building Strategies- example in PlasmoDB Handout: Building search strategies in FungiDB Additional Details: This webinar will guide you through the process of building search strategies in VEuPathDB resources. Topics covered will include:
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| Interpreting RNAseq data in the genome browser (April 30, 2020) Description: This webinar will guide you through the process of viewing RNA-seq coverage tracks in the genome browser and how to use this data to examine gene structure. Specifically, the webinar will cover:
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| Introduction to the genome browser in VEuPathDB (April 23, 2020) Description: This webinar will introduce you to the genome browser in VEuPathDB resources. Topics covered will include:
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| Introduction to VEuPathDB resources (April 16, 2020) Description: This webinar will introduce you to VEuPathDB resources and highlight some of the tools available to you to explore and analyze underlying data. Topics covered will include:
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